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[ Arabidopsis thaliana (thale cress) ]

Gene ID: 842228, updated on 11-Sep-2024

Summary

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Primary source
TAIR:AT1G58936
Locus tag
AT1G58936
See related
Araport:AT1G58936
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T4M14.4; T4M14_4
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (21803600..21805714)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Disease resistance protein (CC-NBS-LRR class) family Neighboring gene pseudo Neighboring gene Ribosomal protein S5 family protein Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Inositol-pentakisphosphate 2-kinase family protein
NP_564736.1
  • Inositol-pentakisphosphate 2-kinase family protein; FUNCTIONS IN: inositol pentakisphosphate 2-kinase activity, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Inositol-pentakisphosphate 2-kinase, metazoa (InterPro:IPR018009), Inositol-pentakisphosphate 2-kinase (InterPro:IPR009286); BEST Arabidopsis thaliana protein match is: Inositol-pentakisphosphate 2-kinase family protein (TAIR:AT1G59312.1); Has 239 Blast hits to 214 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 16; Plants - 88; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21803600..21805714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104631.1 → NP_564736.1  Inositol-pentakisphosphate 2-kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564736.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G1JSI5, Q93WB3
    Conserved Domains (1) summary
    pfam06090
    Location:51 → 466
    Ins_P5_2-kin; Inositol-pentakisphosphate 2-kinase
Nucleotide Protein
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