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alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842118, updated on 18-Sep-2024

Summary

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Official Full Name
alpha/beta-Hydrolases superfamily protein
Primary source
TAIR:AT1G56630
Locus tag
AT1G56630
See related
Araport:AT1G56630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F25P12.93; F25P12_93
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (21223406..21227112, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein with RNI-like/FBD-like domain Neighboring gene ncRNA Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene miscRNA Neighboring gene production of anthocyanin pigment 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
alpha/beta-Hydrolases superfamily protein
NP_001319257.1
  • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G42930.1); Has 1532 Blast hits to 1526 proteins in 353 species: Archae - 0; Bacteria - 521; Metazoa - 41; Fungi - 272; Plants - 392; Viruses - 3; Other Eukaryotes - 303 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    21223406..21227112 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333791.1 → NP_001319257.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WQM0, A0A654EKH6, F4I568
    Conserved Domains (1) summary
    PLN00413
    Location:1 → 488
    PLN00413; triacylglycerol lipase
Nucleotide Protein
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