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GLIP5 GDSL-motif lipase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841830, updated on 18-Sep-2024

Summary

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Official Symbol
GLIP5
Official Full Name
GDSL-motif lipase 5
Primary source
TAIR:AT1G53920
Locus tag
AT1G53920
See related
Araport:AT1G53920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
GDSL-motif lipase 5; T18A20.15; T18A20_15
Summary
Contains lipase signature motif and GDSL domain.
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Genomic context

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See GLIP5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (20137537..20139716)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene linoleate 9S-lipoxygenase-4 protein, putative (DUF581) Neighboring gene uncharacterized protein Neighboring gene Ubiquitin-like superfamily protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Secretome analysis reveals an Arabidopsis lipase involved in defense against Alternaria brassicicola. Oh IS, et al. Plant Cell, 2005 Oct. PMID 16126835, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104270.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lipase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GDSL-motif lipase 5
NP_175795.2
  • GDSL-motif lipase 5 (GLIP5); FUNCTIONS IN: lipase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL lipase 1 (TAIR:AT5G40990.1); Has 3342 Blast hits to 3298 proteins in 168 species: Archae - 0; Bacteria - 231; Metazoa - 0; Fungi - 23; Plants - 3083; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    20137537..20139716
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104270.3 → NP_175795.2  GDSL-motif lipase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175795.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SSA7
    UniProtKB/TrEMBL
    A0A178WKF5
    Conserved Domains (1) summary
    cd01837
    Location:47 → 364
    SGNH_plant_lipase_like; a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SSA7.2

Gene LinkOut

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