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Phosphatidylinositol 3- and 4-kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 839168, updated on 18-Sep-2024

Summary

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Official Full Name
Phosphatidylinositol 3- and 4-kinase family protein
Primary source
TAIR:AT1G26270
Locus tag
AT1G26270
See related
Araport:AT1G26270
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28B23.7; F28B23_7
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (9089469..9092560, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Proline-rich extensin-like family protein Neighboring gene uncharacterized protein Neighboring gene cryptochrome-interacting basic-helix-loop-helix 5 Neighboring gene BSD domain-containing protein Neighboring gene uncharacterized protein Neighboring gene K-box region and MADS-box transcription factor family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078. Tang Y, et al. PLoS Genet, 2016 Aug. PMID 27529511, Free PMC Article
  2. Toward an interaction map of the two-component signaling pathway of Arabidopsis thaliana. Dortay H, et al. J Proteome Res, 2008 Sep. PMID 18642946
  3. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PI4K gamma 5 is important for the normal function of ANAC078 and PI4K gamma 5 is required for ANAC078 cleavage and proteolytic activation. [PI4K gamma 5]
    Title: Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_102391.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein histidine kinase binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Phosphatidylinositol 3- and 4-kinase family protein
NP_564242.1
  • Phosphatidylinositol 3- and 4-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic (InterPro:IPR000403); BEST Arabidopsis thaliana protein match is: phosphoinositide 4-kinase gamma 7 (TAIR:AT2G03890.1); Has 671 Blast hits to 650 proteins in 184 species: Archae - 0; Bacteria - 8; Metazoa - 176; Fungi - 103; Plants - 278; Viruses - 0; Other Eukaryotes - 106 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    9089469..9092560 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_102391.3 → NP_564242.1  Phosphatidylinositol 3- and 4-kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564242.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9C671
    UniProtKB/TrEMBL
    A0A178WJ38, A0A5S9VZP9
    Conserved Domains (2) summary
    cd17039
    Location:43 → 95
    Ubl_ubiquitin_like; ubiquitin-like (Ubl) domain found in ubiquitin and ubiquitin-like Ubl proteins
    pfam00454
    Location:171 → 422
    PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9C671.1

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