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Basic-leucine zipper (bZIP) transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838535, updated on 18-Sep-2024

Summary

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Official Full Name
Basic-leucine zipper (bZIP) transcription factor family protein
Primary source
TAIR:AT1G19490
Locus tag
AT1G19490
See related
Araport:AT1G19490
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18O14.41
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (6751544..6754073, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene DNA glycosylase superfamily protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene RAD-like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Drought-induced AtbZIP62 transcription factor regulates drought stress response in Arabidopsis. Rolly NK, et al. Plant Physiol Biochem, 2020 Nov. PMID 33007532
  2. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833
  3. Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses. Efroni I, et al. Dev Cell, 2013 Feb 25. PMID 23449474, Free PMC Article
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_101806.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to water deprivation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Basic-leucine zipper (bZIP) transcription factor family protein
NP_173381.1
  • Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper transcription factor 16 (TAIR:AT2G35530.1); Has 967 Blast hits to 951 proteins in 159 species: Archae - 2; Bacteria - 7; Metazoa - 181; Fungi - 81; Plants - 591; Viruses - 1; Other Eukaryotes - 104 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6751544..6754073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101806.3 → NP_173381.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173381.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WMA5, A0A654EBC8, Q8L5Y2
    Conserved Domains (1) summary
    cd14702
    Location:166 → 212
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
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