U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838426, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
alpha/beta-Hydrolases superfamily protein
Primary source
TAIR:AT1G18460
Locus tag
AT1G18460
See related
Araport:AT1G18460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15H18.6; F15H18_6
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (6352325..6356113)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Peptidyl-tRNA hydrolase family protein Neighboring gene actin-related protein 4 Neighboring gene Transmembrane Fragile-X-F-associated protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene uncharacterized protein Neighboring gene 2-aminoethanethiol dioxygenase, putative (DUF1637)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Identification of Low-Abundance Lipid Droplet Proteins in Seeds and Seedlings. Kretzschmar FK, et al. Plant Physiol, 2020 Mar. PMID 31826923, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_101703.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in lipid droplet IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha/beta-Hydrolases superfamily protein
NP_173281.1
  • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: lipase activity; INVOLVED IN: glycerol biosynthetic process, lipid metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AB-hydrolase-associated lipase region (InterPro:IPR006693); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G73920.1); Has 1698 Blast hits to 1679 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 1170; Fungi - 262; Plants - 165; Viruses - 0; Other Eukaryotes - 101 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    6352325..6356113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101703.4 → NP_173281.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173281.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W5K2, Q8LPF5
    Conserved Domains (2) summary
    pfam00561
    Location:330 → 632
    Abhydrolase_1; alpha/beta hydrolase fold
    pfam04083
    Location:294 → 349
    Abhydro_lipase; Partial alpha/beta-hydrolase lipase region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools