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HRS1 myb-like transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837890, updated on 18-Sep-2024

Summary

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Official Symbol
HRS1
Official Full Name
myb-like transcription factor family protein
Primary source
TAIR:AT1G13300
Locus tag
AT1G13300
See related
Araport:AT1G13300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1; HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1; T6J4.6; T6J4_6
Summary
Overexpression confers hypersensitivity to low phosphate-elicited inhibition of primary root growth.
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Genomic context

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See HRS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (4556878..4558793)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene allene oxide cyclase 4 Neighboring gene C2H2-like zinc finger protein Neighboring gene Endosomal targeting BRO1-like domain-containing protein Neighboring gene protein phosphatase 2A subunit A3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis thaliana AtHRS1 gene is involved in the response to Heterodera schachtii infection and its overexpression hampers development of syncytia and involves a jasmonic acid-dependent mechanism. Wiśniewska A, et al. J Plant Physiol, 2022 May. PMID 35338957
  2. AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip. Medici A, et al. Nat Commun, 2015 Feb 27. PMID 25723764, Free PMC Article
  3. HRS1 acts as a negative regulator of abscisic acid signaling to promote timely germination of Arabidopsis seeds. Wu C, et al. PLoS One, 2012. PMID 22545134, Free PMC Article
  4. Overexpressing HRS1 confers hypersensitivity to low phosphate-elicited inhibition of primary root growth in Arabidopsis thaliana. Liu H, et al. J Integr Plant Biol, 2009 Apr. PMID 19341407
  5. Nitrate-inducible NIGT1 proteins modulate phosphate uptake and starvation signalling via transcriptional regulation of SPX genes. Ueda Y, et al. Plant J, 2020 May. PMID 31811679

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabidopsis thaliana AtHRS1 gene is involved in the response to Heterodera schachtii infection and its overexpression hampers development of syncytia and involves a jasmonic acid-dependent mechanism.
    Title: Arabidopsis thaliana AtHRS1 gene is involved in the response to Heterodera schachtii infection and its overexpression hampers development of syncytia and involves a jasmonic acid-dependent mechanism.
  2. We propose that NIGT1/HRS1s are major regulators of N starvation responses that play an important role in optimizing N acquisition and utilization under fluctuating N conditions.
    Title: Repression of Nitrogen Starvation Responses by Members of the Arabidopsis GARP-Type Transcription Factor NIGT1/HRS1 Subfamily.
  3. NO3- and P signalling converge via double transcriptional and post-transcriptional control of the same protein, HRS1.
    Title: AtNIGT1/HRS1 integrates nitrate and phosphate signals at the Arabidopsis root tip.
  4. HRS1 knockout mutant (hrs1-1) exhibited significant germination delays on either normal medium or those supplemented with abscisic acid (ABA) or sodium chloride (NaCl), with the magnitude of the delay being substantially larger on the latter media.
    Title: HRS1 acts as a negative regulator of abscisic acid signaling to promote timely germination of Arabidopsis seeds.
  5. HRS1 may be involved in the modulation of primary root and root hair growth in phopshate-deprived Arabidopsis seedlings.
    Title: Overexpressing HRS1 confers hypersensitivity to low phosphate-elicited inhibition of primary root growth in Arabidopsis thaliana.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_101201.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables DNA-binding transcription repressor activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
acts_upstream_of_or_within cellular response to nitrogen compound IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within cellular response to phosphate starvation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within negative regulation of abscisic acid-activated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in negative regulation of abscisic acid-activated signaling pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within primary root development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within regulation of response to nutrient levels IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
myb-like transcription factor family protein
NP_563926.1
  • HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 (HRS1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT3G25790.1); Has 1648 Blast hits to 1627 proteins in 64 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 2; Plants - 1613; Viruses - 8; Other Eukaryotes - 21 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    4556878..4558793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_101201.2 → NP_563926.1  myb-like transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_563926.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FX67
    UniProtKB/TrEMBL
    A0A178W2E4, A0A5S9U7A4, A0A654E9B5
    Conserved Domains (1) summary
    TIGR01557
    Location:181 → 237
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FX67.1

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