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DGL1 dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 836801, updated on 18-Sep-2024

Summary

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Official Symbol
DGL1
Official Full Name
dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
Primary source
TAIR:AT5G66680
Locus tag
AT5G66680
See related
Araport:AT5G66680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DEFECTIVE GLYCOSYLATION; MSN2.7; MSN2_7
Summary
Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.
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Genomic context

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See DGL1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Sequence:
Chromosome: 5; NC_003076.8 (26617399..26620704, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene transmembrane protein, putative (DUF677) Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene homeobox 53

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mutants in DEFECTIVE GLYCOSYLATION, an Arabidopsis homolog of an oligosaccharyltransferase complex subunit, show protein underglycosylation and defects in cell differentiation and growth. Lerouxel O, et al. Plant J, 2005 May. PMID 15860005
  2. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Pendle AF, et al. Mol Biol Cell, 2005 Jan. PMID 15496452, Free PMC Article
  3. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
  4. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
  5. The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. Carter C, et al. Plant Cell, 2004 Dec. PMID 15539469, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. DGL1 is involved in N-linked glycosylation, cell growth and differentiation in plants.[DGL1]
    Title: Mutants in DEFECTIVE GLYCOSYLATION, an Arabidopsis homolog of an oligosaccharyltransferase complex subunit, show protein underglycosylation and defects in cell differentiation and growth.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_126066.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
NOT involved_in cellulose biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within plant-type cell wall organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within protein N-linked glycosylation via asparagine IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within unidimensional cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in nucleolus HDA PubMed 
part_of oligosaccharyltransferase complex ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in plant-type cell wall HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plasmodesma HDA PubMed 
located_in plastid HDA PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein
NP_569038.1
  • DEFECTIVE GLYCOSYLATION (DGL1); FUNCTIONS IN: dolichyl-diphosphooligosaccharide-protein glycotransferase activity; INVOLVED IN: plant-type cell wall organization, protein amino acid N-linked glycosylation via asparagine, unidimensional cell growth; LOCATED IN: in 8 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit (InterPro:IPR005013); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    26617399..26620704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126066.4 → NP_569038.1  dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_569038.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LDT6, Q944K2, Q94CD6, Q9LVR2
    UniProtKB/TrEMBL
    A0A178UHG1, A0A5S9YI53
    Conserved Domains (1) summary
    pfam03345
    Location:43 → 437
    DDOST_48kD; Oligosaccharyltransferase 48 kDa subunit beta
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q944K2.1

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