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MAB1 Transketolase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 835157, updated on 18-Sep-2024

Summary

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Official Symbol
MAB1
Official Full Name
Transketolase family protein
Primary source
TAIR:AT5G50850
Locus tag
AT5G50850
See related
Araport:AT5G50850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K16E14.6; MACCI-BOU
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Genomic context

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See MAB1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
15
Sequence:
Chromosome: 5; NC_003076.8 (20689243..20693470)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclear polyadenylated RNA-binding protein Neighboring gene alpha-taxilin-like protein Neighboring gene Protein kinase superfamily protein Neighboring gene ubiquitin-conjugating enzyme 27 Neighboring gene alpha/beta-Hydrolases superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development. Ohbayashi I, et al. Plant Physiol, 2019 Jun. PMID 30894418, Free PMC Article
  2. Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. Kruft V, et al. Plant Physiol, 2001 Dec. PMID 11743114, Free PMC Article
  3. The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Zhang Y, et al. Plant Physiol, 2018 Jul. PMID 29794018, Free PMC Article
  4. Analysis of the Arabidopsis mitochondrial proteome. Millar AH, et al. Plant Physiol, 2001 Dec. PMID 11743115, Free PMC Article
  5. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development.
    Title: Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_124463.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
NOT located_in Golgi apparatus RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
NOT located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in nucleolus HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plastid HDA PubMed 

General protein information

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Preferred Names
Transketolase family protein
NP_199898.1
  • MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    20689243..20693470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_124463.4 → NP_199898.1  Transketolase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199898.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q38799, Q9LSM8
    UniProtKB/TrEMBL
    A0A178UM82, A0A5S9YDE4, A0A654GAS7
    Conserved Domains (1) summary
    PLN02683
    Location:11 → 363
    PLN02683; pyruvate dehydrogenase E1 component subunit beta
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q38799.2

Gene LinkOut

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