U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

F-box and associated interaction domains-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834249, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
F-box and associated interaction domains-containing protein
Primary source
TAIR:AT5G42430
Locus tag
AT5G42430
See related
Araport:AT5G42430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MDH9.12; MDH9_12
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (16971312..16972499, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene Nucleotide-sugar transporter family protein Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

Go to the top of the page Help
Preferred Names
F-box and associated interaction domains-containing protein
NP_199058.1
  • F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G30920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    16971312..16972499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123608.1 → NP_199058.1  F-box and associated interaction domains-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_199058.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FIH4
    UniProtKB/TrEMBL
    A0A654G772
    Conserved Domains (3) summary
    TIGR01640
    Location:104 → 339
    F_box_assoc_1; F-box protein interaction domain
    pfam00646
    Location:9 → 52
    F-box; F-box domain
    pfam08268
    Location:202 → 331
    FBA_3; F-box associated domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FIH4.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools