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lipid transporter [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830656, updated on 18-Sep-2024

Summary

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Official Full Name
lipid transporter
Primary source
TAIR:AT5G07630
Locus tag
AT5G07630
See related
Araport:AT5G07630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MBK20.7; MBK20_7
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Genomic context

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Location:
chromosome: 5
Exon count:
17
Sequence:
Chromosome: 5; NC_003076.8 (2410703..2414750)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box family protein Neighboring gene Protein kinase superfamily protein Neighboring gene tRNA-Leu Neighboring gene RING/U-box superfamily protein Neighboring gene Actin-binding FH2 protein Neighboring gene structural maintenance of chromosomes 6A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001342954.1
NM_120845.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
lipid transporter
NP_196380.5
  • lipid transporters; FUNCTIONS IN: lipid transporter activity; INVOLVED IN: nuclear division, lipid transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RFT1 (InterPro:IPR007594); Has 367 Blast hits to 362 proteins in 190 species: Archae - 2; Bacteria - 15; Metazoa - 110; Fungi - 135; Plants - 51; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2410703..2414750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120845.5 → NP_196380.5  lipid transporter [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196380.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y337, F4K836
    Conserved Domains (2) summary
    COG2244
    Location:100 → 605
    RfbX; Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane/envelope biogenesis]
    cd13130
    Location:99 → 531
    MATE_rft1; Rft1-like subfamily of the multidrug and toxic compound extrusion family (MATE)

  2. NM_001342954.1 → NP_001332151.1  lipid transporter [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UNU1, A0A1P8BG39
Nucleotide Protein
Heading Accession and Version

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