U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

epsK putative extracellular matrix component exporter; putative cyclic di-GMP receptor [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 8302980, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
epsK
Gene description
putative extracellular matrix component exporter; putative cyclic di-GMP receptor
Locus tag
BSU_34265
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34265
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000964.3 (3517485..3519002, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene pyruvyl transferase for matrix biofilm formation Neighboring gene putative aminotransferase involved in biofilm matrix formation Neighboring gene putative O-acetyltransferase involved in biofilm matrix formation Neighboring gene putative phosphotransferase involved in extracellular matrix synthesis Neighboring gene putative glycosyl transferase involved in biofilm matrix formation Neighboring gene putative polysaccharide pyruvyl transferase involved in biofilm matrix formation Neighboring gene putative glycosyltransferase involved in biofilm formation

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
putative extracellular matrix component exporter; putative cyclic di-GMP receptor
YP_003097789.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15175311, 15661000, 15849754, 16850406, 26078454, 27897378; Product type t : transporter

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3517485..3519002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003097789.1 putative extracellular matrix component exporter; putative cyclic di-GMP receptor [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for YP_003097789.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAP1ED01
    Conserved Domains (1) summary
    cd12082
    Location:9 → 419
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71060.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases