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Phox (PX) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829348, updated on 18-Sep-2024

Summary

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Official Full Name
Phox (PX) domain-containing protein
Primary source
TAIR:AT4G32160
Locus tag
AT4G32160
See related
Araport:AT4G32160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10N7.30; F10N7_30
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Sequence:
Chromosome: 4; NC_003075.7 (15528425..15533279)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene EamA-like transporter family Neighboring gene vesicle-associated membrane protein 711 Neighboring gene cytochrome P450, family 96, subfamily A, polypeptide 2 Neighboring gene PNAS-3-like protein Neighboring gene pantothenate kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ENDOSOMAL RAB EFFECTOR WITH PX-DOMAIN, an Interacting Partner of RAB5 GTPases, Regulates Membrane Trafficking to Protein Storage Vacuoles in Arabidopsis. Sakurai HT, et al. Plant Cell, 2016 Jun. PMID 27288222, Free PMC Article
  2. Learning the lipid language of plant signalling. van Leeuwen W, et al. Trends Plant Sci, 2004 Aug. PMID 15358268
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_119368.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphatidylinositol binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endosome membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Phox (PX) domain-containing protein
NP_567888.2
  • Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT2G25350.1); Has 33521 Blast hits to 21186 proteins in 1483 species: Archae - 481; Bacteria - 3615; Metazoa - 17372; Fungi - 2745; Plants - 1628; Viruses - 165; Other Eukaryotes - 7515 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15528425..15533279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119368.3 → NP_567888.2  Phox (PX) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567888.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JTJ2, O49376, Q93YV8
    UniProtKB/TrEMBL
    A0A178V2R0, A0A5S9XXU0, A0A654FUR4, A0A7G2F2I0
    Conserved Domains (2) summary
    COG1196
    Location:388 → 600
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cl02563
    Location:48 → 161
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JTJ2.1

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