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LOC8287729 ethylene-responsive transcription factor CRF2 [ Ricinus communis (castor bean) ]

Gene ID: 8287729, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8287729
Gene description
ethylene-responsive transcription factor CRF2
Locus tag
RCOM_1690990
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8287729 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 5 NC_063260.1 (26162786..26164634)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994274.1 (3387764..3389602)

Chromosome 5 - NC_063260.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase At4g23740 Neighboring gene ubiquitin-conjugating enzyme E2 28 Neighboring gene arabinogalactan protein 41 Neighboring gene serine/threonine-protein kinase GIN4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor CRF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063260.1 Reference ASM1957865v1

    Range
    26162786..26164634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002509872.4 → XP_002509918.1  ethylene-responsive transcription factor CRF2

    See identical proteins and their annotated locations for XP_002509918.1

    UniProtKB/TrEMBL
    B9RCN4
    Conserved Domains (1) summary
    smart00380
    Location:113 → 169
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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