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ORP4A OSBP(oxysterol binding protein)-related protein 4A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828692, updated on 18-Sep-2024

Summary

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Official Symbol
ORP4A
Official Full Name
OSBP(oxysterol binding protein)-related protein 4A
Primary source
TAIR:AT4G25860
Locus tag
AT4G25860
See related
Araport:AT4G25860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14M19.140; F14M19_140; OSBP(oxysterol binding protein)-related protein 4A
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Genomic context

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See ORP4A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (13147289..13149606)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphatase 1 Neighboring gene oxysterol-binding 4B-like protein Neighboring gene OSBP(oxysterol binding protein)-related protein 4B Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene miscRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis glutaredoxin S17 and its partner, the nuclear factor Y subunit C11/negative cofactor 2α, contribute to maintenance of the shoot apical meristem under long-day photoperiod. Knuesting J, et al. Plant Physiol, 2015 Apr. PMID 25699589, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_118719.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
OSBP(oxysterol binding protein)-related protein 4A
NP_194316.2
  • OSBP(oxysterol binding protein)-related protein 4A (ORP4A); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.1); Has 2166 Blast hits to 2165 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1078; Fungi - 636; Plants - 233; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13147289..13149606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001341766.1 → NP_001329919.1  OSBP(oxysterol binding protein)-related protein 4A [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B978, A0A5S9XVW3

  2. NM_118719.4 → NP_194316.2  OSBP(oxysterol binding protein)-related protein 4A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194316.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SVZ9
    UniProtKB/TrEMBL
    A0A178UUV7
    Conserved Domains (1) summary
    pfam01237
    Location:38 → 363
    Oxysterol_BP; Oxysterol-binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SVZ9.2

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