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ORP4B OSBP(oxysterol binding protein)-related protein 4B [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828691, updated on 18-Sep-2024

Summary

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Official Symbol
ORP4B
Official Full Name
OSBP(oxysterol binding protein)-related protein 4B
Primary source
TAIR:AT4G25850
Locus tag
AT4G25850
See related
Araport:AT4G25850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14M19.130; F14M19_130; OSBP(oxysterol binding protein)-related protein 4B
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Genomic context

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See ORP4B in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (13142164..13146966)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene glycerol-3-phosphatase 1 Neighboring gene oxysterol-binding 4B-like protein Neighboring gene OSBP(oxysterol binding protein)-related protein 4A Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001341765.1
NM_118718.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
OSBP(oxysterol binding protein)-related protein 4B
NP_001190842.1
  • OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1).
NP_567732.1
  • OSBP(oxysterol binding protein)-related protein 4B (ORP4B); FUNCTIONS IN: oxysterol binding; INVOLVED IN: steroid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4A (TAIR:AT4G25860.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    13142164..13146966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203913.1 → NP_001190842.1  OSBP(oxysterol binding protein)-related protein 4B [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190842.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XWK1, A0A654FSS7, F4JTE8
    Conserved Domains (1) summary
    pfam01237
    Location:139 → 465
    Oxysterol_BP; Oxysterol-binding protein

  2. NM_118718.2 → NP_567732.1  OSBP(oxysterol binding protein)-related protein 4B [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567732.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8GXS2, Q9SW00
    UniProtKB/TrEMBL
    A0A178V180
    Conserved Domains (1) summary
    pfam01237
    Location:37 → 363
    Oxysterol_BP; Oxysterol-binding protein

  3. NM_001341765.1 → NP_001328917.1  OSBP(oxysterol binding protein)-related protein 4B [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B646
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SW00.2

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