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LOC8286758 transcription factor TCP20 [ Ricinus communis (castor bean) ]

Gene ID: 8286758, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8286758
Gene description
transcription factor TCP20
Locus tag
RCOM_1078980
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8286758 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (28647670..28649135)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994293.1 (642851..644322, complement)

Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein DDB_G0279979 Neighboring gene glucose-6-phosphate 1-dehydrogenase 2, chloroplastic Neighboring gene ACT domain-containing protein ACR4 Neighboring gene photosynthetic NDH subunit of lumenal location 5, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor TCP20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063262.1 Reference ASM1957865v1

    Range
    28647670..28649135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002514830.4 → XP_002514876.1  transcription factor TCP20

    See identical proteins and their annotated locations for XP_002514876.1

    UniProtKB/TrEMBL
    B9RMA7
    Conserved Domains (1) summary
    pfam03634
    Location:62 → 163
    TCP; TCP family transcription factor

  2. XM_015716630.3 → XP_015572116.1  transcription factor TCP20

    UniProtKB/TrEMBL
    B9RMA7
    Conserved Domains (1) summary
    pfam03634
    Location:62 → 163
    TCP; TCP family transcription factor
Nucleotide Protein
Heading Accession and Version

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