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cpHsc70-1 chloroplast heat shock protein 70-1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828531, updated on 18-Sep-2024

Summary

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Official Symbol
cpHsc70-1
Official Full Name
chloroplast heat shock protein 70-1
Primary source
TAIR:AT4G24280
Locus tag
AT4G24280
See related
Araport:AT4G24280
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
chloroplast heat shock protein 70-1; T22A6.110; T22A6_110
Summary
Involved in protein import into chloroplasts during early developmental stages.
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Genomic context

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See cpHsc70-1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Sequence:
Chromosome: 4; NC_003075.7 (12589810..12593800)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene EMBRYO DEFECTIVE 140 Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene MAC/Perforin domain-containing protein Neighboring gene Peptidase C50, separase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis stromal 70-kD heat shock proteins are essential for plant development and important for thermotolerance of germinating seeds. Su PH, et al. Plant Physiol, 2008 Mar. PMID 18192441, Free PMC Article
  2. Tissue-Specific Regulation of Plastid Protein Import via Transit-Peptide Motifs. Chu CC, et al. Plant Cell, 2020 Apr. PMID 32075863, Free PMC Article
  3. Functional analysis of the Chloroplast GrpE (CGE) proteins from Arabidopsis thaliana. de Luna-Valdez LA, et al. Plant Physiol Biochem, 2019 Jun. PMID 30927692
  4. Stromal Hsp70 is important for protein translocation into pea and Arabidopsis chloroplasts. Su PH, et al. Plant Cell, 2010 May. PMID 20484004, Free PMC Article
  5. Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family. Sung DY, et al. Plant Physiol, 2001 Jun. PMID 11402207, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. insertion knockout mutant plants exhibited variegated cotyledons, malformed leaves, growth retardation, and impaired root growth
    Title: Arabidopsis stromal 70-kD heat shock proteins are essential for plant development and important for thermotolerance of germinating seeds.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_118561.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding HDA PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein folding TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within protein targeting to chloroplast IMP
Inferred from Mutant Phenotype
more info
 PubMed 
NOT involved_in response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to heat IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in chloroplast stroma IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol HDA PubMed 
located_in intracellular anatomical structure IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in nucleus HDA PubMed 
located_in plastid IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plastid stroma TAS
Traceable Author Statement
more info
 PubMed 
located_in thylakoid HDA PubMed 

General protein information

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Preferred Names
chloroplast heat shock protein 70-1
NP_194159.1
  • chloroplast heat shock protein 70-1 (cpHsc70-1); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: protein folding, response to cadmium ion, protein targeting to chloroplast, response to cold; LOCATED IN: in 7 components; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein 70, conserved site (InterPro:IPR018181), Chaperone DnaK (InterPro:IPR012725), Heat shock protein Hsp70 (InterPro:IPR001023), Heat shock protein 70 (InterPro:IPR013126); BEST Arabidopsis thaliana protein match is: chloroplast heat shock protein 70-2 (TAIR:AT5G49910.1); Has 36155 Blast hits to 36031 proteins in 4857 species: Archae - 160; Bacteria - 17964; Metazoa - 3544; Fungi - 1694; Plants - 1235; Viruses - 354; Other Eukaryotes - 11204 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    12589810..12593800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118561.3 → NP_194159.1  chloroplast heat shock protein 70-1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_194159.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9STW6
    UniProtKB/TrEMBL
    A0A178V345, A0A5S9XVD2
    Conserved Domains (1) summary
    PLN03184
    Location:40 → 716
    PLN03184; chloroplast Hsp70; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9STW6.1

Gene LinkOut

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