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SMO1-2 sterol C4-methyl oxidase 1-2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 828374, updated on 18-Sep-2024

Summary

Official Symbol
SMO1-2
Official Full Name
sterol C4-methyl oxidase 1-2
Primary source
TAIR:AT4G22756
Locus tag
AT4G22756
See related
Araport:AT4G22756
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATSMO1; ATSMO1-2; SMO1; STEROL 4-ALPHA-METHYL-OXIDASE 1; STEROL C4-METHYL OXIDASE 1; sterol C4-methyl oxidase 1-2
Summary
Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.
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Genomic context

See SMO1-2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (11954840..11956918, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene methylsterol monooxygenase 1-3 Neighboring gene tRNA-Lys Neighboring gene PPR containing protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_118404.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables C-4 methylsterol oxidase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
sterol C4-methyl oxidase 1-2
NP_567670.1
  • sterol C4-methyl oxidase 1-2 (SMO1-2); FUNCTIONS IN: C-4 methylsterol oxidase activity, 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity, catalytic activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: sterol-4alpha-methyl oxidase 1-1 (TAIR:AT4G12110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    11954840..11956918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_118404.5NP_567670.1  sterol C4-methyl oxidase 1-2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567670.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q1EC69, Q8GT72, Q8LAD9
    UniProtKB/TrEMBL
    A0A178V1A7, A0A7G2F4P7
    Conserved Domains (1) summary
    pfam04116
    Location:132267
    FA_hydroxylase; Fatty acid hydroxylase superfamily