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LOC8278944 zinc finger CCCH domain-containing protein 30 [ Ricinus communis (castor bean) ]

Gene ID: 8278944, updated on 30-Nov-2023

Summary

Gene symbol
LOC8278944
Gene description
zinc finger CCCH domain-containing protein 30
Locus tag
RCOM_0089240
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

See LOC8278944 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 10 NC_063265.1 (19308484..19312856, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994515.1 (56471..60840)

Chromosome 10 - NC_063265.1Genomic Context describing neighboring genes Neighboring gene putative pentatricopeptide repeat-containing protein At5g52630 Neighboring gene protein DETOXIFICATION 42-like Neighboring gene zinc finger CCCH domain-containing protein 30 Neighboring gene probable polygalacturonase At3g15720

Genomic regions, transcripts, and products

General protein information

Preferred Names
zinc finger CCCH domain-containing protein 30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063265.1 Reference ASM1957865v1

    Range
    19308484..19312856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002526672.4XP_002526718.1  zinc finger CCCH domain-containing protein 30

    See identical proteins and their annotated locations for XP_002526718.1

    UniProtKB/TrEMBL
    B9SL49
    Conserved Domains (4) summary
    smart00356
    Location:302326
    ZnF_C3H1; zinc finger
    cd00204
    Location:86165
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:46156
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:87120
    ANK; ANK repeat [structural motif]
  2. XM_015723909.3XP_015579395.1  zinc finger CCCH domain-containing protein 30

    UniProtKB/TrEMBL
    B9SL49
    Conserved Domains (4) summary
    smart00356
    Location:302326
    ZnF_C3H1; zinc finger
    cd00204
    Location:86165
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:46156
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:87120
    ANK; ANK repeat [structural motif]
  3. XM_015723908.3XP_015579394.1  zinc finger CCCH domain-containing protein 30

    UniProtKB/TrEMBL
    B9SL49
    Conserved Domains (4) summary
    smart00356
    Location:302326
    ZnF_C3H1; zinc finger
    cd00204
    Location:86165
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:46156
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:87120
    ANK; ANK repeat [structural motif]