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LOC8275851 zinc finger CCCH domain-containing protein 39 [ Ricinus communis (castor bean) ]

Gene ID: 8275851, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8275851
Gene description
zinc finger CCCH domain-containing protein 39
Locus tag
RCOM_0221060
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8275851 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 3 NC_063258.1 (26329725..26332645, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994442.1 (138879..141767)

Chromosome 3 - NC_063258.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8275853 Neighboring gene nudix hydrolase 19, chloroplastic Neighboring gene RNA-binding protein involved in heterochromatin assembly dri1 Neighboring gene uncharacterized LOC125369470

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063258.1 Reference ASM1957865v1

    Range
    26329725..26332645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002524413.4 → XP_002524459.1  zinc finger CCCH domain-containing protein 39

    See identical proteins and their annotated locations for XP_002524459.1

    UniProtKB/TrEMBL
    B9SEP0
    Conserved Domains (3) summary
    COG5063
    Location:34 → 259
    CTH1; CCCH-type Zn-finger protein [General function prediction only]
    pfam00642
    Location:230 → 256
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    pfam11709
    Location:167 → 205
    Mit_ribos_Mrp51; Mitochondrial ribosomal protein subunit
Nucleotide Protein
Heading Accession and Version

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