U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8270647 LOB domain-containing protein 19 [ Ricinus communis (castor bean) ]

Gene ID: 8270647, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC8270647
Gene description
LOB domain-containing protein 19
Locus tag
RCOM_1612270
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8270647 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 1 NC_063256.1 (1197931..1202239, complement)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994279.1 (854816..858313, complement)

Chromosome 1 - NC_063256.1Genomic Context describing neighboring genes Neighboring gene 65-kDa microtubule-associated protein 4 Neighboring gene uncharacterized LOC8270646 Neighboring gene LOB domain-containing protein 18 Neighboring gene pentatricopeptide repeat-containing protein At1g01970 Neighboring gene transfer RNA glutamic acid (anticodon CUC)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOB domain-containing protein 19

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063256.1 Reference ASM1957865v1

    Range
    1197931..1202239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002511683.4 → XP_002511729.1  LOB domain-containing protein 19

    See identical proteins and their annotated locations for XP_002511729.1

    UniProtKB/TrEMBL
    B9RDE0
    Conserved Domains (2) summary
    pfam03195
    Location:8 → 106
    DUF260; Protein of unknown function DUF260
    pfam08172
    Location:89 → 142
    CASP_C; CASP C terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials