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LOC8269992 protein RADIALIS-like 5 [ Ricinus communis (castor bean) ]

Gene ID: 8269992, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8269992
Gene description
protein RADIALIS-like 5
Locus tag
RCOM_1594510
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8269992 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 2 NC_063257.1 (2134746..2136717)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994277.1 (2553152..2555078, complement)

Chromosome 2 - NC_063257.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At3g23020 Neighboring gene U-box domain-containing protein 5 Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene zinc-finger homeodomain protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RADIALIS-like 3; protein RADIALIS-like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063257.1 Reference ASM1957865v1

    Range
    2134746..2136717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015718536.3 → XP_015574022.1  protein RADIALIS-like 3 isoform X2

    UniProtKB/TrEMBL
    B9R7V8
    Conserved Domains (2) summary
    smart00717
    Location:17 → 64
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd00167
    Location:17 → 63
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

  2. XM_002510355.4 → XP_002510401.2  protein RADIALIS-like 5 isoform X1

    Conserved Domains (2) summary
    smart00717
    Location:17 → 64
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd00167
    Location:17 → 63
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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