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BAT5 bile acid transporter 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826811, updated on 18-Sep-2024

Summary

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Official Symbol
BAT5
Official Full Name
bile acid transporter 5
Primary source
TAIR:AT4G12030
Locus tag
AT4G12030
See related
Araport:AT4G12030
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
BASS5; bile acid transporter 5; BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5; F16J13.100; F16J13_100
Summary
Required for the biosynthesis of methionine-derived glucosinolates. Involved in the transport of 2-keto acids between chloroplasts and the cytosol.
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Genomic context

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See BAT5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (7210807..7213376)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Disease resistance protein (TIR-NBS-LRR class) family Neighboring gene protein kinase family protein Neighboring gene A20/AN1-like zinc finger family protein Neighboring gene ncRNA Neighboring gene Putative AT-hook DNA-binding family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis bile acid:sodium symporter family protein 5 is involved in methionine-derived glucosinolate biosynthesis. Sawada Y, et al. Plant Cell Physiol, 2009 Sep. PMID 19633020, Free PMC Article
  2. The plastidic bile acid transporter 5 is required for the biosynthesis of methionine-derived glucosinolates in Arabidopsis thaliana. Gigolashvili T, et al. Plant Cell, 2009 Jun. PMID 19542295, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. BAT5 is identified as the first transporter component of the aliphatic glucosinolate biosynthetic pathway.
    Title: The plastidic bile acid transporter 5 is required for the biosynthesis of methionine-derived glucosinolates in Arabidopsis thaliana.
  2. BASS5 (At4g12030) acts as a transporter of methionine derivatives across chloroplast membranes.
    Title: Arabidopsis bile acid:sodium symporter family protein 5 is involved in methionine-derived glucosinolate biosynthesis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001340768.1
NM_117273.3
NM_202809.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables monocarboxylic acid transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within glucosinolate biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in glucosinolate biosynthetic process from homomethionine IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to jasmonic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to wounding IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plastid IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
bile acid transporter 5
NP_001319909.1
  • bile acid transporter 5 (BAT5); CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT4G22840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_974538.1
  • bile acid transporter 5 (BAT5); CONTAINS InterPro DOMAIN/s: Bile acid:sodium symporter (InterPro:IPR002657); BEST Arabidopsis thaliana protein match is: Sodium Bile acid symporter family (TAIR:AT4G22840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    7210807..7213376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001340769.1 → NP_001328579.1  bile acid transporter 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JPW1
    Conserved Domains (1) summary
    COG0385
    Location:2 → 272
    YfeH; Predicted Na+-dependent transporter [General function prediction only]

  2. NM_001340770.1 → NP_001328580.1  bile acid transporter 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B530

  3. NM_001340768.1 → NP_001319909.1  bile acid transporter 5 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JPW1
    Conserved Domains (1) summary
    COG0385
    Location:2 → 272
    YfeH; Predicted Na+-dependent transporter [General function prediction only]

  4. NM_202809.3 → NP_974538.1  bile acid transporter 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974538.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JPW1, Q94A17, Q9SZ68
    UniProtKB/TrEMBL
    A0A654FNC3, A0A7G2F1T1
    Conserved Domains (1) summary
    COG0385
    Location:106 → 406
    YfeH; Predicted Na+-dependent transporter [General function prediction only]

  5. NM_117273.3 → NP_567385.1  bile acid transporter 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567385.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JPW1
    Conserved Domains (1) summary
    COG0385
    Location:2 → 272
    YfeH; Predicted Na+-dependent transporter [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JPW1.1

Gene LinkOut

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