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NdhT Chaperone DnaJ-domain superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826517, updated on 18-Sep-2024

Summary

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Official Symbol
NdhT
Official Full Name
Chaperone DnaJ-domain superfamily protein
Primary source
TAIR:AT4G09350
Locus tag
AT4G09350
See related
Araport:AT4G09350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CHLORORESPIRATORY REDUCTION J; CRRJ; DJC75; DNA J protein C75; NADH dehydrogenase-like complex T; T30A10.110; T30A10_110
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Genomic context

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See NdhT in Genome Data Viewer
Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (5931110..5932475, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene nucleoside diphosphate kinase Neighboring gene SPla/RYanodine receptor (SPRY) domain-containing protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene NB-ARC domain-containing disease resistance protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis chloroplast J protein DJC75/CRRJ mediates nitrate-promoted seed germination in the dark. Ciou HS, et al. Ann Bot, 2020 Jun 1. PMID 32157271, Free PMC Article
  2. An Src homology 3 domain-like fold protein forms a ferredoxin binding site for the chloroplast NADH dehydrogenase-like complex in Arabidopsis. Yamamoto H, et al. Plant Cell, 2011 Apr. PMID 21505067, Free PMC Article
  3. Evolution of chloroplast J proteins. Chiu CC, et al. PLoS One, 2013. PMID 23894646, Free PMC Article
  4. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_117003.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of NAD(P)H dehydrogenase complex (plastoquinone) IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in chloroplast HDA PubMed 
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast thylakoid membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
Chaperone DnaJ-domain superfamily protein
NP_192673.1
  • Chaperone DnaJ-domain superfamily protein; FUNCTIONS IN: heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Molecular chaperone Hsp40/DnaJ family protein (TAIR:AT1G80030.2); Has 22215 Blast hits to 22211 proteins in 3226 species: Archae - 172; Bacteria - 9488; Metazoa - 3742; Fungi - 1942; Plants - 2004; Viruses - 8; Other Eukaryotes - 4859 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    5931110..5932475 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117003.3 → NP_192673.1  Chaperone DnaJ-domain superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192673.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q680H9, Q9SMS0
    UniProtKB/TrEMBL
    A0A654FML0
    Conserved Domains (1) summary
    pfam00226
    Location:106 → 169
    DnaJ; DnaJ domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SMS0.1

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