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SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826497, updated on 18-Sep-2024

Summary

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Official Full Name
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Primary source
TAIR:AT4G09160
Locus tag
AT4G09160
See related
Araport:AT4G09160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8A17.90; T8A17_90
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (5839599..5842456)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene T-complex protein 11 Neighboring gene low-molecular-weight cysteine-rich 36 Neighboring gene uncharacterized protein Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PATELLINS are regulators of auxin-mediated PIN1 relocation and plant development in Arabidopsis thaliana. Tejos R, et al. J Cell Sci, 2018 Jan 29. PMID 28687624
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001340613.1
NM_001340614.1
NM_116985.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to auxin stimulus IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within protein localization involved in auxin polar transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
NP_192655.2
  • SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G72160.1); Has 12185 Blast hits to 8606 proteins in 820 species: Archae - 53; Bacteria - 1604; Metazoa - 4851; Fungi - 2300; Plants - 1007; Viruses - 130; Other Eukaryotes - 2240 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    5839599..5842456
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116985.3 → NP_192655.2  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192655.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WP99, Q9M0R2
    UniProtKB/TrEMBL
    A0A5S9XRD8
    Conserved Domains (2) summary
    cd00170
    Location:383 → 547
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
    pfam03765
    Location:308 → 360
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

  2. NM_001340613.1 → NP_001328491.1  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B4R9, A0A5S9XRD8

  3. NM_001340614.1 → NP_001328490.1  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B4T6, A0A5S9XRD8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9M0R2.2

Gene LinkOut

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