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glycine-rich protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826373, updated on 18-Sep-2024

Summary

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Official Full Name
glycine-rich protein
Primary source
TAIR:AT4G08230
Locus tag
AT4G08230
See related
Araport:AT4G08230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T12G13.70; T12G13_70
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (5187785..5189794, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene pseudo Neighboring gene histone-lysine N-methyltransferase Neighboring gene GRAS family transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_001203759.1
NM_116892.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  

General protein information

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Preferred Names
glycine-rich protein
NP_001190688.1
  • glycine-rich protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage.
NP_192563.2
  • glycine-rich protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    5187785..5189794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116892.5 → NP_192563.2  glycine-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_192563.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V327, A0A7G2EY04, Q8VY68
    Conserved Domains (1) summary
    pfam10961
    Location:2 → 65
    SelK_SelG; Selenoprotein SelK_SelG

  2. NM_001203759.1 → NP_001190688.1  glycine-rich protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190688.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V598, F4JFX0
Nucleotide Protein
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