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LOC8262097 ethylene-responsive transcription factor ERF054 [ Ricinus communis (castor bean) ]

Gene ID: 8262097, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8262097
Gene description
ethylene-responsive transcription factor ERF054
Locus tag
RCOM_1175560
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8262097 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 7 NC_063262.1 (867237..869779)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994326.1 (681833..684144, complement)

Chromosome 7 - NC_063262.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8262099 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 Neighboring gene protochlorophyllide reductase Neighboring gene protein STABILIZED1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF054

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063262.1 Reference ASM1957865v1

    Range
    867237..869779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002517903.4 → XP_002517949.1  ethylene-responsive transcription factor ERF054

    See identical proteins and their annotated locations for XP_002517949.1

    UniProtKB/TrEMBL
    B9RW30
    Conserved Domains (1) summary
    smart00380
    Location:214 → 276
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version

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