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DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 826193, updated on 18-Sep-2024

Summary

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Official Full Name
DHHC-type zinc finger family protein
Primary source
TAIR:AT4G00840
Locus tag
AT4G00840
See related
Araport:AT4G00840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
A_TM018A10.8; A_TM018A10_8; T18A10.14; T18A10_14
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Genomic context

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Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (355211..357296, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein family Neighboring gene IQ-domain 17 Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene GRF1-interacting factor 3 Neighboring gene monopolar spindle protein (DUF1138) Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001340271.1
NM_116310.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DHHC-type zinc finger family protein
NP_567193.2
  • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G60800.1); Has 5117 Blast hits to 5115 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2189; Fungi - 766; Plants - 830; Viruses - 0; Other Eukaryotes - 1332 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    355211..357296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_116310.5 → NP_567193.2  DHHC-type zinc finger family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567193.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O23092, Q5M757
    UniProtKB/TrEMBL
    A0A178UV61, A0A654FKZ1
    Conserved Domains (1) summary
    cl19890
    Location:4 → 266
    zf-DHHC; DHHC palmitoyltransferase

  2. NM_001340271.1 → NP_001329082.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B6M5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5M757.1

Gene LinkOut

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