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LOC8261609 zinc finger protein ZAT12 [ Ricinus communis (castor bean) ]

Gene ID: 8261609, updated on 30-Nov-2023

Summary

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Gene symbol
LOC8261609
Gene description
zinc finger protein ZAT12
Locus tag
RCOM_0390960
Gene type
protein coding
RefSeq status
MODEL
Organism
Ricinus communis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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Genomic context

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See LOC8261609 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1957865v1 (GCF_019578655.1) 8 NC_063263.1 (17774760..17775502)
101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994971.1 (78850..79590, complement)

Chromosome 8 - NC_063263.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor Y subunit beta-like Neighboring gene methyl-CpG-binding domain-containing protein 7 Neighboring gene uncharacterized LOC8261608 Neighboring gene ras-related protein RABE1c

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to chitin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZAT12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1957865v1

Genomic

  1. NC_063263.1 Reference ASM1957865v1

    Range
    17774760..17775502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002533064.4 → XP_002533110.1  zinc finger protein ZAT12

    See identical proteins and their annotated locations for XP_002533110.1

    UniProtKB/TrEMBL
    B9T4E1
    Conserved Domains (2) summary
    sd00017
    Location:38 → 58
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:36 → 61
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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