DHHC-type zinc finger family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: DHHC-type zinc finger family protein
Primary source: TAIR:AT3G51390
Locus tag: AT3G51390
See related: Araport:AT3G51390
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AtPAT10; PAT10; PROTEIN S-ACYL TRANSFERASE 10
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 11

Sequence:: Chromosome: 3; NC_003074.8 (19075544..19078120)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

S-acylation of CBL10/SCaBP8 by PAT10 is crucial for its tonoplast association and function in salt tolerance.
Title: S-acylation of CBL10/SCaBP8 by PAT10 is crucial for its tonoplast association and function in salt tolerance.
PAT10 role in abscisic acid sensitive stomatal movement.
Title: A Tonoplast-Associated Calcium-Signaling Module Dampens ABA Signaling during Stomatal Movement.
PAT10 loss of function caused hypersensitivity to salt stresses.
Title: Protein S-ACYL Transferase10 is critical for development and salt tolerance in Arabidopsis.
AtPAT10 is localized in the Golgi stack, trans-Golgi network/early endosome and tonoplast. Loss-of-function mutants have a pleiotropic phenotype involving cell expansion and division, vascular patterning, and fertility.
Title: A Golgi and tonoplast localized S-acyl transferase is involved in cell expansion, cell division, vascular patterning and fertility in Arabidopsis.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_114998.5

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables protein-cysteine S-palmitoyltransferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in plant organ development	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in response to salt stress	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in plant-type vacuole	HDA more info	PubMed
located_in plant-type vacuole membrane	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: DHHC-type zinc finger family protein

NP_566950.1

DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT3G56930.1); Has 4950 Blast hits to 4948 proteins in 248 species: Archae - 0; Bacteria - 0; Metazoa - 2153; Fungi - 685; Plants - 832; Viruses - 0; Other Eukaryotes - 1280 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

19075544..19078120

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001339514.1 → NP_001326942.1 DHHC-type zinc finger family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1I9LQT3

Conserved Domains (1) summary

pfam01529
Location:159 → 226

DHHC; DHHC palmitoyltransferase
NM_114998.5 → NP_566950.1 DHHC-type zinc finger family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_566950.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q7XA86, Q8LAV8, Q9SD10

UniProtKB/TrEMBL

A0A178VFJ8, A0A5S9XJT9

Conserved Domains (1) summary

pfam01529
Location:164 → 231

DHHC; DHHC palmitoyltransferase