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CEJ1 cooperatively regulated by ethylene and jasmonate 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824188, updated on 18-Sep-2024

Summary

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Official Symbol
CEJ1
Official Full Name
cooperatively regulated by ethylene and jasmonate 1
Primary source
TAIR:AT3G50260
Locus tag
AT3G50260
See related
Araport:AT3G50260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATERF#011; cooperatively regulated by ethylene and jasmonate 1; DEAR1; DREB AND EAR MOTIF PROTEIN 1
Summary
Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.
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Genomic context

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See CEJ1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (18634546..18635514)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ATP binding microtubule motor family protein Neighboring gene uncharacterized protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene HXXXD-type acyl-transferase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DEAR1, a transcriptional repressor of DREB protein that mediates plant defense and freezing stress responses in Arabidopsis. Tsutsui T, et al. J Plant Res, 2009 Nov. PMID 19618250
  2. The Arabidopsis transcriptional repressor ERF9 participates in resistance against necrotrophic fungi. Maruyama Y, et al. Plant Sci, 2013 Dec. PMID 24157210
  3. Transcriptional regulation of nitrogen-associated metabolism and growth. Gaudinier A, et al. Nature, 2018 Nov. PMID 30356219
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_114886.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within defense response to bacterium IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within positive regulation of programmed cell death IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to bacterium IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to cold IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cooperatively regulated by ethylene and jasmonate 1
NP_190595.1
  • cooperatively regulated by ethylene and jasmonate 1 (CEJ1); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: DREB and EAR motif protein 2 (TAIR:AT5G67190.1); Has 5544 Blast hits to 5466 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5538; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18634546..18635514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114886.3 → NP_190595.1  cooperatively regulated by ethylene and jasmonate 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190595.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SNE1
    UniProtKB/TrEMBL
    A0A178VN80, A0A5S9XJL9, A0A654FGF1
    Conserved Domains (1) summary
    smart00380
    Location:21 → 81
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SNE1.1

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