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oxidoreductase, zinc-binding dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 822497, updated on 18-Sep-2024

Summary

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Official Full Name
oxidoreductase, zinc-binding dehydrogenase family protein
Primary source
TAIR:AT3G28670
Locus tag
AT3G28670
See related
Araport:AT3G28670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
12
Sequence:
Chromosome: 3; NC_003074.8 (10743769..10747202)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene miscRNA Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene Serine carboxypeptidase S28 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001338965.1
NM_113787.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
oxidoreductase, zinc-binding dehydrogenase family protein
NP_566839.1
  • oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); Has 151 Blast hits to 150 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    10743769..10747202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001338964.1 → NP_001327530.1  oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1I9LSL4, A0A5S9XGJ6

  2. NM_113787.3 → NP_566839.1  oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566839.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHR1, A0A384K940, A0A5S9XGJ6, Q944S5
    Conserved Domains (1) summary
    pfam14778
    Location:29 → 406
    ODR4-like; Olfactory receptor 4-like

  3. NM_001338965.1 → NP_001327529.1  oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VHR1, A0A384K940, A0A5S9XGJ6, Q944S5
    Conserved Domains (1) summary
    pfam14778
    Location:29 → 406
    ODR4-like; Olfactory receptor 4-like
Nucleotide Protein
Heading Accession and Version

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