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AAE16 AMP-dependent synthetase and ligase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821961, updated on 18-Sep-2024

Summary

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Official Symbol
AAE16
Official Full Name
AMP-dependent synthetase and ligase family protein
Primary source
TAIR:AT3G23790
Locus tag
AT3G23790
See related
Araport:AT3G23790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
acyl activating enzyme 16
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Genomic context

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See AAE16 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Sequence:
Chromosome: 3; NC_003074.8 (8575051..8581331)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene nuclear RNA polymerase D2A Neighboring gene selenium-binding protein 3 Neighboring gene ralf-like 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Disruption of plastid acyl:acyl carrier protein synthetases increases medium chain fatty acid accumulation in seeds of transgenic Arabidopsis. Tjellström H, et al. FEBS Lett, 2013 Apr 2. PMID 23454211
  2. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  3. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results indicate AAE15 (AT4G14070)/ AAE16 (At3g23790) are involved in activation of plastid synthesized medium-chain fatty acids (MCFA) as well as those supplied exogenously to plant tissues.
    Title: Disruption of plastid acyl:acyl carrier protein synthetases increases medium chain fatty acid accumulation in seeds of transgenic Arabidopsis.
Submit: New GeneRIF Correction

General gene information

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NM_113283.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within fatty acid biosynthetic process IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 

General protein information

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Preferred Names
AMP-dependent synthetase and ligase family protein
NP_189021.2
  • acyl activating enzyme 16 (AAE16); FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding (InterPro:IPR020459), AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: acyl-activating enzyme 15 (TAIR:AT4G14070.1); Has 72182 Blast hits to 54949 proteins in 3465 species: Archae - 1133; Bacteria - 50819; Metazoa - 2739; Fungi - 2717; Plants - 2582; Viruses - 1; Other Eukaryotes - 12191 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    8575051..8581331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_113283.4 → NP_189021.2  AMP-dependent synthetase and ligase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_189021.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LRT1, Q9LK39
    UniProtKB/TrEMBL
    A0A178VKD9, A0A5S9XF13, A0A654FHS4
    Conserved Domains (2) summary
    PTZ00237
    Location:232 → 281
    PTZ00237; acetyl-CoA synthetase; Provisional
    cd17640
    Location:106 → 709
    LC_FACS_like; Long-chain fatty acid CoA synthetase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LK39.1

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