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GPAT5 glycerol-3-phosphate acyltransferase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820316, updated on 18-Sep-2024

Summary

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Official Symbol
GPAT5
Official Full Name
glycerol-3-phosphate acyltransferase 5
Primary source
TAIR:AT3G11430
Locus tag
AT3G11430
See related
Araport:AT3G11430
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATGPAT5; glycerol-3-phosphate acyltransferase 5; GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5; GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5
Summary
sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester.
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Genomic context

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See GPAT5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_003074.8 (3595694..3597952)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene myb domain protein 65 Neighboring gene DnaJ and Myb-like DNA-binding domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Monoacylglycerols are components of root waxes and can be produced in the aerial cuticle by ectopic expression of a suberin-associated acyltransferase. Li Y, et al. Plant Physiol, 2007 Jul. PMID 17496107, Free PMC Article
  2. The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis. Beisson F, et al. Plant Cell, 2007 Jan. PMID 17259262, Free PMC Article
  3. New insights of low-temperature plasma effects on germination of three genotypes of Arabidopsis thaliana seeds under osmotic and saline stresses. Bafoil M, et al. Sci Rep, 2019 Jun 17. PMID 31209339, Free PMC Article
  4. A land-plant-specific glycerol-3-phosphate acyltransferase family in Arabidopsis: substrate specificity, sn-2 preference, and evolution. Yang W, et al. Plant Physiol, 2012 Oct. PMID 22864585, Free PMC Article
  5. The Arabidopsis Proteins AtNHR2A and AtNHR2B Are Multi-Functional Proteins Integrating Plant Immunity With Other Biological Processes. Singh R, et al. Front Plant Sci, 2020. PMID 32194606, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. New insights of low-temperature plasma effects on germination of three genotypes of Arabidopsis thaliana seeds under osmotic and saline stresses.
    Title: New insights of low-temperature plasma effects on germination of three genotypes of Arabidopsis thaliana seeds under osmotic and saline stresses.
  2. GPAT5 expression correlated with production of both alpha- and beta-isomers of monoacylglycerols with C22 and C24 saturated acyl groups and the corresponding free fatty acids
    Title: Monoacylglycerols are components of root waxes and can be produced in the aerial cuticle by ectopic expression of a suberin-associated acyltransferase.
  3. GPAT5 has a critical role in polyester biogenesis in seed coats and roots.
    Title: The acyltransferase GPAT5 is required for the synthesis of suberin in seed coat and root of Arabidopsis.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_111976.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycerol-3-phosphate 2-O-acyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables glycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables organic anion transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in CDP-diacylglycerol biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within suberin biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate acyltransferase 5
NP_187750.1
  • glycerol-3-phosphate acyltransferase 5 (GPAT5); CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 7 (TAIR:AT5G06090.1); Has 397 Blast hits to 386 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 0; Plants - 368; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    3595694..3597952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111976.4 → NP_187750.1  glycerol-3-phosphate acyltransferase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187750.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9CAY3
    UniProtKB/TrEMBL
    A0A178VCP1, A0A5S9XBD0
    Conserved Domains (1) summary
    PLN02499
    Location:3 → 502
    PLN02499; glycerol-3-phosphate acyltransferase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9CAY3.1

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