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putative acyl-coenzyme A oxidase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819854, updated on 18-Sep-2024

Summary

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Official Full Name
putative acyl-coenzyme A oxidase
Primary source
TAIR:AT3G06690
Locus tag
AT3G06690
See related
Araport:AT3G06690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_003074.8 (2115426..2116825, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene binding protein Neighboring gene Ribosomal L29e protein family Neighboring gene Ribosomal L29e protein family Neighboring gene E3 ubiquitin ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Acyl-CoA oxidase 1 from Arabidopsis thaliana. Structure of a key enzyme in plant lipid metabolism. Pedersen L, et al. J Mol Biol, 2005 Jan 21. PMID 15581893
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
  
enables acyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol HDA PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative acyl-coenzyme A oxidase
NP_187325.4
  • acyl-CoA oxidases;oxidoreductases, acting on the CH-CH group of donors;FAD binding;oxidoreductases;acyl-CoA oxidases; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, oxidoreductase activity, FAD binding, acyl-CoA oxidase activity; INVOLVED IN: oxidation reduction, fatty acid beta-oxidation, fatty acid metabolic process; LOCATED IN: peroxisome; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase (InterPro:IPR012258), Acyl-CoA oxidase, C-terminal (InterPro:IPR002655), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 3 (TAIR:AT1G06290.1); Has 259 Blast hits to 259 proteins in 95 species: Archae - 0; Bacteria - 114; Metazoa - 30; Fungi - 20; Plants - 76; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    2115426..2116825 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111549.4 → NP_187325.4  putative acyl-coenzyme A oxidase [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_187325.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JC35, P0CZ24
    UniProtKB/TrEMBL
    A0A654F4V7
    Conserved Domains (1) summary
    pfam01756
    Location:49 → 182
    ACOX; Acyl-CoA oxidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CZ24.1

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