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ribosomal RNA small subunit methyltransferase G [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819207, updated on 18-Sep-2024

Summary

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Official Full Name
ribosomal RNA small subunit methyltransferase G
Primary source
TAIR:AT2G45990
Locus tag
AT2G45990
See related
Araport:AT2G45990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F4I18.49
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Sequence:
Chromosome: 2; NC_003071.7 (18919316..18921511)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 86, subfamily A, polypeptide 8 Neighboring gene mesoderm induction early response protein Neighboring gene ncRNA Neighboring gene LDL receptor wingless signaling/trafficking chaperone Neighboring gene transcription regulatory protein SNF2 Neighboring gene ubiquitin-conjugating enzyme 6 Neighboring gene ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. Peltier JB, et al. Mol Cell Proteomics, 2006 Jan. PMID 16207701
  2. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  4. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001036469.2
NM_001036470.1
NM_130162.4
NM_180112.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
ribosomal RNA small subunit methyltransferase G
NP_001031546.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001031547.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_566060.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
NP_850443.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 312 Blast hits to 312 proteins in 90 species: Archae - 0; Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    18919316..18921511
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180112.3 → NP_850443.1  ribosomal RNA small subunit methyltransferase G [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850443.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W200, O82790

  2. NM_130162.4 → NP_566060.1  ribosomal RNA small subunit methyltransferase G [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566060.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W200, O82790

  3. NM_001036469.2 → NP_001031546.1  ribosomal RNA small subunit methyltransferase G [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031546.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IH73

  4. NM_001036470.1 → NP_001031547.1  ribosomal RNA small subunit methyltransferase G [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031547.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IH74
Nucleotide Protein
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