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Mitochondrial transcription termination factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 819007, updated on 18-Sep-2024

Summary

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Official Full Name
Mitochondrial transcription termination factor family protein
Primary source
TAIR:AT2G44020
Locus tag
AT2G44020
See related
Araport:AT2G44020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6E13.15
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (18217559..18219559, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene uncharacterized protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Dihydrodipicolinate reductase, bacterial/plant

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_129964.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Mitochondrial transcription termination factor family protein
NP_566005.1
  • Mitochondrial transcription termination factor family protein; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT4G02990.1); Has 1566 Blast hits to 959 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 1360; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    18217559..18219559 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129964.3 → NP_566005.1  Mitochondrial transcription termination factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566005.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VQA2, A0A5S9X6T8, A0A654F6X9, O80572
    Conserved Domains (1) summary
    PLN03196
    Location:21 → 507
    PLN03196; MOC1-like protein; Provisional
Nucleotide Protein
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