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AT2G31370 Basic-leucine zipper (bZIP) transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817695, updated on 7-Sep-2023

Summary

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Gene symbol
AT2G31370
Gene description
Basic-leucine zipper (bZIP) transcription factor family protein
Primary source
Araport:AT2G31370
Locus tag
AT2G31370
See related
TAIR:AT2G31370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
PosF21; T28P16.14; T28P16_14
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Genomic context

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See AT2G31370 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Sequence:
Chromosome: 2; NC_003071.7 (13378929..13381761)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glyoxalase 2-5 Neighboring gene 16:0delta9 desaturase 2 Neighboring gene salt tolerance homologue Neighboring gene pfkB-like carbohydrate kinase family protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis thaliana mutant air1 implicates SOS3 in the regulation of anthocyanins under salt stress. Van Oosten MJ, et al. Plant Mol Biol, 2013 Nov. PMID 23925404
  2. Isolation and molecular characterization of PosF21, an Arabidopsis thaliana gene which shows characteristics of a b-Zip class transcription factor. Aeschbacher RA, et al. Plant J, 1991 Nov. PMID 1844885
  3. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Xu C, et al. Nat Plants, 2018 Feb. PMID 29358751
  4. Analysis of functions of VIP1 and its close homologs in osmosensory responses of Arabidopsis thaliana. Tsugama D, et al. PLoS One, 2014. PMID 25093810, Free PMC Article
  5. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001036379.3
NM_001036380.2
NM_001202721.1
NM_001336329.1
NM_128694.2
NM_179836.2
NM_179837.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables transcription cis-regulatory region binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Basic-leucine zipper (bZIP) transcription factor family protein
NP_001031456.2
  • Basic-leucine zipper (bZIP) transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 55870 Blast hits to 21504 proteins in 1137 species: Archae - 14; Bacteria - 3019; Metazoa - 20926; Fungi - 6116; Plants - 3494; Viruses - 436; Other Eukaryotes - 21865 (source: NCBI BLink).
NP_001031457.1
  • Basic-leucine zipper (bZIP) transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_001318327.1
  • Basic-leucine zipper (bZIP) transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1).
NP_180695.1
  • Basic-leucine zipper (bZIP) transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 55870 Blast hits to 21504 proteins in 1137 species: Archae - 14; Bacteria - 3019; Metazoa - 20926; Fungi - 6116; Plants - 3494; Viruses - 436; Other Eukaryotes - 21865 (source: NCBI BLink).
NP_850167.1
  • Basic-leucine zipper (bZIP) transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 55870 Blast hits to 21504 proteins in 1137 species: Archae - 14; Bacteria - 3019; Metazoa - 20926; Fungi - 6116; Plants - 3494; Viruses - 436; Other Eukaryotes - 21865 (source: NCBI BLink).
NP_850168.2
  • Basic-leucine zipper (bZIP) transcription factor family protein; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT1G06070.1); Has 55870 Blast hits to 21504 proteins in 1137 species: Archae - 14; Bacteria - 3019; Metazoa - 20926; Fungi - 6116; Plants - 3494; Viruses - 436; Other Eukaryotes - 21865 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13378929..13381761
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336329.1 → NP_001318327.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04088, Q27GL1, Q3EBQ8
    UniProtKB/TrEMBL
    A0A178W306, A0A384L503, A0A5S9X351, B9DGB1
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

  2. NM_128694.2 → NP_180695.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180695.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04088, Q27GL1, Q3EBQ8
    UniProtKB/TrEMBL
    A0A178W306, A0A384L503, A0A5S9X351, B9DGB1
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

  3. NM_001036379.3 → NP_001031456.2  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031456.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04088, Q27GL1, Q3EBQ8
    UniProtKB/TrEMBL
    A0A178W306, A0A384L503, A0A5S9X351, B9DGB1
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

  4. NM_001036380.2 → NP_001031457.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031457.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X351, F4IQT9
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

  5. NM_001202721.1 → NP_001189650.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189650.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04088, Q27GL1, Q3EBQ8
    UniProtKB/TrEMBL
    A0A178W306, A0A384L503, A0A5S9X351, B9DGB1
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

  6. NM_179836.2 → NP_850167.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850167.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04088, Q27GL1, Q3EBQ8
    UniProtKB/TrEMBL
    A0A178W306, A0A384L503, A0A5S9X351, B9DGB1
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain

  7. NM_179837.2 → NP_850168.2  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850168.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q04088, Q27GL1, Q3EBQ8
    UniProtKB/TrEMBL
    A0A178W306, A0A384L503, A0A5S9X351, B9DGB1
    Conserved Domains (1) summary
    cd14703
    Location:204 → 253
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04088.1

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