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alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817604, updated on 18-Sep-2024

Summary

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Official Full Name
alpha/beta-Hydrolases superfamily protein
Primary source
TAIR:AT2G30550
Locus tag
AT2G30550
See related
Araport:AT2G30550
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DAD1-Like Lipase 3; DALL3; T6B20.10; T6B20_10
Summary
Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (13014530..13017329)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain protein Neighboring gene Thioredoxin superfamily protein Neighboring gene glycine-rich protein Neighboring gene photosystem II reaction center W

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Investigation of the interaction of DAD1-LIKE LIPASE 3 (DALL3) with Selenium Binding Protein 1 (SBP1) in Arabidopsis thaliana. Dervisi I, et al. Plant Sci, 2020 Feb. PMID 31928671
  2. Enzymatic characterization of class I DAD1-like acylhydrolase members targeted to chloroplast in Arabidopsis. Seo YS, et al. FEBS Lett, 2009 Jul 7. PMID 19527719
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

NM_128607.4
NM_179817.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables galactolipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phospholipase A1 activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables triacylglycerol lipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
alpha/beta-Hydrolases superfamily protein
NP_565701.1
  • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.1); Has 1575 Blast hits to 1566 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 303; Plants - 685; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink).
NP_850148.1
  • alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G06800.2); Has 1565 Blast hits to 1557 proteins in 299 species: Archae - 0; Bacteria - 279; Metazoa - 58; Fungi - 305; Plants - 673; Viruses - 3; Other Eukaryotes - 247 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13014530..13017329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128607.4 → NP_565701.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565701.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04340, Q3EBR6
    UniProtKB/TrEMBL
    A0A178VP00, A0A5S9X2T0
    Conserved Domains (1) summary
    PLN02753
    Location:1 → 528
    PLN02753; triacylglycerol lipase

  2. NM_179817.2 → NP_850148.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850148.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VP00, F4INU9
    Conserved Domains (1) summary
    cl21494
    Location:1 → 449
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3EBR6.2

Gene LinkOut

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