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bromodomain protein (DUF761) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817151, updated on 18-Sep-2024

Summary

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Official Full Name
bromodomain protein (DUF761)
Primary source
TAIR:AT2G26110
Locus tag
AT2G26110
See related
Araport:AT2G26110
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T19L18.8; T19L18_8
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (11120523..11122146)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene Galactosyltransferase family protein Neighboring gene glycine-rich protein Neighboring gene RING/U-box protein with C6HC-type zinc finger

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_128169.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
bromodomain protein (DUF761)
NP_180180.3
  • Protein of unknown function (DUF761); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF761, plant (InterPro:IPR008480); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11120523..11122146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_128169.5 → NP_180180.3  bromodomain protein (DUF761) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180180.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    O80986, Q67XS0
    Conserved Domains (2) summary
    pfam05553
    Location:270 → 304
    DUF761; Cotton fibre expressed protein
    pfam14364
    Location:40 → 67
    DUF4408; Domain of unknown function (DUF4408)
Nucleotide Protein
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