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NAD(P)-binding Rossmann-fold superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816923, updated on 18-Sep-2024

Summary

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Official Full Name
NAD(P)-binding Rossmann-fold superfamily protein
Primary source
TAIR:AT2G23910
Locus tag
AT2G23910
See related
Araport:AT2G23910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T29E15.11; T29E15_11
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (10177776..10180088)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase Neighboring gene Pectin lyase-like superfamily protein Neighboring gene Putative small nuclear ribonucleoprotein G Neighboring gene transmembrane protein (DUF788) Neighboring gene Eukaryotic aspartyl protease family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001335872.1
NM_127952.3

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NAD(P)-binding Rossmann-fold superfamily protein
NP_565557.1
  • NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: lignin biosynthetic process, response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT4G30470.1); Has 3676 Blast hits to 3671 proteins in 648 species: Archae - 0; Bacteria - 619; Metazoa - 80; Fungi - 341; Plants - 1990; Viruses - 0; Other Eukaryotes - 646 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    10177776..10180088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335870.1 → NP_001325238.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VRG1, A0A1P8B2J9, A0A5S9X0Y5, Q8LET8

  2. NM_001335871.1 → NP_001325239.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VRG1, A0A1P8B2M1, A0A5S9X0Y5, Q8LET8

  3. NM_127952.3 → NP_565557.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565557.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VRG1, A0A5S9X0Y5, O82219
    Conserved Domains (2) summary
    PLN02583
    Location:2 → 302
    PLN02583; cinnamoyl-CoA reductase
    pfam01370
    Location:12 → 244
    Epimerase; NAD dependent epimerase/dehydratase family

  4. NM_001335872.1 → NP_001325237.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VRG1, A0A1P8B2J5, A0A5S9X0Y5, A0A654EX59
Nucleotide Protein
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