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Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816877, updated on 18-Sep-2024

Summary

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Official Full Name
Protein kinase superfamily protein
Primary source
TAIR:AT2G23450
Locus tag
AT2G23450
See related
Araport:AT2G23450
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F26B6.10; F26B6_10
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (9988678..9992010, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene extra-large G-protein 1 Neighboring gene root UVB sensitive protein (Protein of unknown function, DUF647) Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. WALL-ASSOCIATED KINASE Like 14 regulates vascular tissue development in Arabidopsis and tomato. Ma Y, et al. Plant Sci, 2024 Apr. PMID 38309474
  2. A user-friendly platform for yeast two-hybrid library screening using next generation sequencing. Erffelinck ML, et al. PLoS One, 2018. PMID 30576311, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_127909.2
NM_179710.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables pectin binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
  
involved_in xylem development IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
Protein kinase superfamily protein
NP_565552.1
  • Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like (InterPro:IPR006210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G66790.1); Has 113981 Blast hits to 112485 proteins in 3193 species: Archae - 103; Bacteria - 12981; Metazoa - 41291; Fungi - 9532; Plants - 32683; Viruses - 360; Other Eukaryotes - 17031 (source: NCBI BLink).
NP_850041.1
  • Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), EGF-like (InterPro:IPR006210), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G66790.1); Has 113981 Blast hits to 112485 proteins in 3193 species: Archae - 103; Bacteria - 12981; Metazoa - 41291; Fungi - 9532; Plants - 32683; Viruses - 360; Other Eukaryotes - 17031 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9988678..9992010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127909.2 → NP_565552.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565552.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80461, Q8RY67
    UniProtKB/TrEMBL
    A0A654F0I5
    Conserved Domains (2) summary
    smart00220
    Location:348 → 616
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14066
    Location:354 → 623
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

  2. NM_179710.3 → NP_850041.1  Protein kinase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850041.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80461, Q8RY67
    UniProtKB/TrEMBL
    A0A654F0I5
    Conserved Domains (2) summary
    smart00220
    Location:348 → 616
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14066
    Location:354 → 623
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RY67.2

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