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Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816803, updated on 18-Sep-2024

Summary

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Official Full Name
Major facilitator superfamily protein
Primary source
TAIR:AT2G22730
Locus tag
AT2G22730
See related
Araport:AT2G22730
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T9I22.17; T9I22_17
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Genomic context

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Location:
chromosome: 2
Exon count:
16
Sequence:
Chromosome: 2; NC_003071.7 (9660858..9664133)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene SPT2 chromatin protein Neighboring gene SU(VAR)3-9 homolog 6 Neighboring gene ncRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
  2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001335816.1
NM_001335817.1
NM_001335818.1
NM_001335819.1
NM_127838.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Major facilitator superfamily protein
NP_179858.2
  • Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G65687.1); Has 17716 Blast hits to 17664 proteins in 2057 species: Archae - 323; Bacteria - 13331; Metazoa - 891; Fungi - 1841; Plants - 194; Viruses - 0; Other Eukaryotes - 1136 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9660858..9664133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001335815.1 → NP_001324704.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0X5, A0A654EV81

  2. NM_001335814.1 → NP_001324705.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0X9, A0A5S9X0H5

  3. NM_127838.3 → NP_179858.2  Major facilitator superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179858.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IKF6, Q9ZQ41
    UniProtKB/TrEMBL
    A0A5S9X0H5
    Conserved Domains (2) summary
    cd06174
    Location:52 → 477
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:88 → 437
    MFS_1; Major Facilitator Superfamily

  4. NM_001335816.1 → NP_001324701.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B102

  5. NM_001335818.1 → NP_001324703.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EV81
    Conserved Domains (2) summary
    cd06174
    Location:52 → 477
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:88 → 437
    MFS_1; Major Facilitator Superfamily

  6. NM_001335817.1 → NP_001324700.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0Y7, A0A5S9X0H5, A0A654EV81

  7. NM_001335819.1 → NP_001324702.1  Major facilitator superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0W8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4IKF6.1

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