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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816677, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT2G21385
Locus tag
AT2G21385
See related
Araport:AT2G21385
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
11
Sequence:
Chromosome: 2; NC_003071.7 (9149577..9151970)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene xylulose kinase-1 Neighboring gene Kinesin motor family protein Neighboring gene Coatomer, alpha subunit Neighboring gene SHI-related sequence3 Neighboring gene vacuolar proton ATPase A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Arabidopsis Protein CGLD11 Is Required for Chloroplast ATP Synthase Accumulation. Grahl S, et al. Mol Plant, 2016 Jun 6. PMID 26979383
  2. BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 3 Facilitates Assembly of the Chloroplast ATP Synthase Complex. Zhang L, et al. Plant Physiol, 2016 Jun. PMID 27208269, Free PMC Article
  3. Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. Froehlich JE, et al. J Proteome Res, 2003 Jul-Aug. PMID 12938931
  4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. BFA3 appears to function as a molecular chaperone that transiently associates with unassembled CF1beta at its catalytic site.[BFA3]
    Title: BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 3 Facilitates Assembly of the Chloroplast ATP Synthase Complex.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001084465.1
NM_001335747.1
NM_001335748.1
NM_001335749.1
NM_127710.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
acts_upstream_of_or_within proton-transporting ATP synthase complex assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast envelope HDA PubMed 
located_in chloroplast stroma HDA PubMed 
located_in chloroplast stroma IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001077934.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
NP_001318260.1
  • unknown protein.
NP_001318261.1
  • unknown protein.
NP_565511.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    9149577..9151970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127710.4 → NP_565511.1  uncharacterized protein AT2G21385 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565511.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VSE0, A0A654EUS8, Q94AU3

  2. NM_001335749.1 → NP_001324299.1  uncharacterized protein AT2G21385 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQF3, F4IGM5

  3. NM_001335748.1 → NP_001318260.1  uncharacterized protein AT2G21385 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4IGM4

  4. NM_001335747.1 → NP_001318261.1  uncharacterized protein AT2G21385 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQF3, F4IGM5

  5. NM_001084465.1 → NP_001077934.1  uncharacterized protein AT2G21385 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077934.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQF3, F4IGM5
Nucleotide Protein
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