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PF3D7_1460700 60S ribosomal protein L27 [ Plasmodium falciparum 3D7 ]

Gene ID: 812161, updated on 12-Sep-2024

Summary

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Gene symbol
PF3D7_1460700
Gene description
60S ribosomal protein L27
Locus tag
PF3D7_1460700
See related
PlasmoDB:PF3D7_1460700; VEuPathDB:PF3D7_1460700
Gene type
protein coding
RNA name
60S ribosomal protein L27
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
Orthologs
all
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Genomic context

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See PF3D7_1460700 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Sequence:
Chromosome: 14; NC_037283.1 (2475501..2476473, complement)

Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene inner membrane complex sub-compartment protein 3 Neighboring gene snRNA-activating protein complex subunit 3, putative Neighboring gene apicoplast ribosomal protein S10, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037283.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine. Wong W, et al. Elife, 2014 Jun 9. PMID 24913268, Free PMC Article
  2. Functional Characterization of the m(6)A-Dependent Translational Modulator PfYTH.2 in the Human Malaria Parasite. Sinha A, et al. mBio, 2021 Apr 27. PMID 33906926, Free PMC Article
  3. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  4. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  5. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
60S ribosomal protein L27

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037283.1 Reference assembly

    Range
    2475501..2476473 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001348717.2 → XP_001348753.2  60S ribosomal protein L27 [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001348753.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024WHS1, A0A024WZA5, A0A2I0C315, Q8IKM5, W4I8E0, W4IW93, W7F6Y7, W7FXY4, W7J509
    Conserved Domains (1) summary
    cd06090
    Location:6 → 87
    KOW_RPL27; KOW motif of eukaryotic Ribosomal Protein L27
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
1VX7_1.1
3J79_1.1
5UMD_1.1

Gene LinkOut

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