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LOC8083565 zinc-finger homeodomain protein 2 [ Sorghum bicolor (sorghum) ]

Gene ID: 8083565, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8083565
Gene description
zinc-finger homeodomain protein 2
Locus tag
SORBI_3007G160400
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8083565 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 7 NC_012876.2 (59513026..59514608, complement)

Chromosome 7 - NC_012876.2Genomic Context describing neighboring genes Neighboring gene mitochondrial uncoupling protein 5 Neighboring gene cyclin-D4-1 Neighboring gene serine/threonine-protein kinase PEPKR2 Neighboring gene protein DETOXIFICATION 27-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012876.2 Chromosome 7 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc-finger homeodomain protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012876.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    59513026..59514608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002445604.2 → XP_002445649.1  zinc-finger homeodomain protein 2

    See identical proteins and their annotated locations for XP_002445649.1

    UniProtKB/TrEMBL
    A0A921QPK2, C5YMP0
    Conserved Domains (2) summary
    TIGR01565
    Location:248 → 304
    homeo_ZF_HD; homeobox domain, ZF-HD class
    pfam04770
    Location:75 → 128
    ZF-HD_dimer; ZF-HD protein dimerization region
Nucleotide Protein
Heading Accession and Version

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