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LOC8076986 protein FAR1-RELATED SEQUENCE 5 [ Sorghum bicolor (sorghum) ]

Gene ID: 8076986, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8076986
Gene description
protein FAR1-RELATED SEQUENCE 5
Locus tag
SORBI_3009G170550
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8076986 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (52623696..52627957)

Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8061802 Neighboring gene zinc transporter 5 Neighboring gene uncharacterized LOC8076987 Neighboring gene uncharacterized LOC110430141

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAR1-RELATED SEQUENCE 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    52623696..52627957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002439900.2 → XP_002439945.2  protein FAR1-RELATED SEQUENCE 5

    Conserved Domains (1) summary
    cl28060
    Location:211 → 951
    FAR1; FAR1 DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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