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LOC8071537 BEL1-like homeodomain protein 7 [ Sorghum bicolor (sorghum) ]

Gene ID: 8071537, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8071537
Gene description
BEL1-like homeodomain protein 7
Locus tag
SORBI_3008G188900
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8071537 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 8 NC_012877.2 (62311408..62316533, complement)

Chromosome 8 - NC_012877.2Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF5 Neighboring gene ankyrin repeat and SOCS box protein 3 Neighboring gene uncharacterized LOC8071538 Neighboring gene ubiquitin-conjugating enzyme 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012877.2 Chromosome 8 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEL1-like homeodomain protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012877.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    62311408..62316533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021445917.1 → XP_021301592.1  BEL1-like homeodomain protein 7

    UniProtKB/TrEMBL
    A0A921QHD9, C5YT09
    Conserved Domains (2) summary
    pfam05920
    Location:406 → 445
    Homeobox_KN; Homeobox KN domain
    pfam07526
    Location:200 → 338
    POX; Associated with HOX

  2. XM_002443609.2 → XP_002443654.1  BEL1-like homeodomain protein 7

    See identical proteins and their annotated locations for XP_002443654.1

    UniProtKB/TrEMBL
    A0A921QHD9, C5YT09
    Conserved Domains (2) summary
    pfam05920
    Location:406 → 445
    Homeobox_KN; Homeobox KN domain
    pfam07526
    Location:200 → 338
    POX; Associated with HOX
Nucleotide Protein
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