U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8071063 basic leucine zipper 8 [ Sorghum bicolor (sorghum) ]

Gene ID: 8071063, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC8071063
Gene description
basic leucine zipper 8
Locus tag
SORBI_3004G074700
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8071063 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 4 NC_012873.2 (6048256..6049211, complement)

Chromosome 4 - NC_012873.2Genomic Context describing neighboring genes Neighboring gene sodium-coupled neutral amino acid transporter 1-like Neighboring gene E3 ubiquitin-protein ligase AIP2 Neighboring gene serine/threonine protein phosphatase 2A regulatory subunit B''beta Neighboring gene protein GLUTAMINE DUMPER 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012873.2 Chromosome 4 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
basic leucine zipper 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012873.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    6048256..6049211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002453407.2 → XP_002453452.1  basic leucine zipper 8

    See identical proteins and their annotated locations for XP_002453452.1

    UniProtKB/TrEMBL
    A0A921R4U7, C5XX34
    Conserved Domains (2) summary
    cd14686
    Location:81 → 125
    bZIP; coiled coil [structural motif]
    cl21462
    Location:78 → 144
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials